LLL05 Genic Interaction Extraction Challenge:
FULLY ANNOTATED DATA NOW AVAILABLE
http://genome.jouy.inra.fr/texte/LLLchallenge/
The LLL05 challenge task is to learn rules to extract protein/gene
interactions from biology abstracts from the Medline bibliography
database. All the training data is now available and contains the
following information:
* Annotation indicating agent and target of a gene interaction
* A dictionary of named entities (including variants and synonyms)
* Linguistic information: word segmentation, lemmatization and
syntactic dependencies.
The goal of the challenge is to test the ability of the participating
IE systems to identify the interactions and the gene/proteins that
interact. The participants will test their IE patterns on a test set
with the aim of extracting the correct agent and target. The challenge
task is associated with the 4th "Learning Language in Logic" workshop
( http://www.cs.york.ac.uk/aig/lll/lll05/ ). Results for this task are
to be reported by the submission of a 4-page paper to the LLL05
workshop.
Important dates
1 April 2005 Challenge test data made available
27 April 2005 Challenge task paper submission deadline
11 May 2005 Challenge task paper notification
30 May 2005 Workshop notes available on-line
-- James Cussens jc@cs.york.ac.uk Department of Computer Science Tel +44 (0)1904 434732 University of York Fax +44 (0)1904 432767 Heslington, York YO10 5DD, UK http://www.cs.york.ac.uk/~jc
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